Dr. Deborah Chasman

Position title: Postdoctoral Researcher

Email: chasman@cs.wisc.edu

330 North Orchard Street
Madison WI 53715
Room 3243A


  • B.A., Computer Science, Carleton College
  • Ph.D., Computer Sciences, University of Wisconsin–Madison

Research Description

  • Postdoc work: Computational gene prioritization from integrated -omics data in support of systems virology.
  • PhD work: Integer linear programming-based methods for inferring interpretable, mechanistic biological subnetworks.

Selected Publications

  • Chasman D, Ho YH, Berry DB, Nemec CM, MacGilvray ME, Hose J, Merrill AE, Lee MV, Will JL, Coon JJ, Ansari AZ, Craven M, Gasch AP (2014) Pathway connectivity and signaling coordination in the yeast stress-activated signaling network. Mol Syst Biol 10(11):759. doi: 10.15252/msb.20145120
  • Chasman D, Gancarz B, Hao L, Ferris M, Ahlquist P, Craven M (2014) Inferring host gene subnetworks involved in viral replication. PLoS Comput Biol 10(5): e1003626. doi:10.1371/journal.pcbi.1003626